The development of an agro-industrial complex under present-day conditions is impossible to imagine without the development of agro-biotechnology, which in turn requires specialists with profound knowledge of biology, chemistry and related sciences. In this regard, training of personnel is needed to ensure active implementation of modern technologies in agricultural sciences. Until recently, such specialists have not been trained at classical universities, to which St. Petersburg State University belongs. To deal with this challenge, a Masters Program «Molecular Biology and Agrobiotechnology of Plants» has been developed and is being implemented in SPbSU. Teaching staff from eight departments of the Biological Faculty of SPbSU is involved in the creation and implementation of the Program. The Program in question is focused on familiarizing students with the modern problems, achievements, methodology of agro-biotechnology of plants, as well as on practical application of the obtained knowledge. Special attention is paid to the formation of trainees’ perceptions of the possibility and necessity of bringing plant breeding to the level of requirements and possibilities of the «post-genome era» to achieve high productivity and sustainability of agricultural production with minimal environmental risks. The Program seamlessly integrates practical exercises and students’ research work in the SPbSU facilities, as well as that performed at St. Petersburg research institutes. Much attention is paid to the development of students’ skills in conducting scientific discussions and in presenting their scientific data in different formats, for instance in English, which is very important for monitoring current scientific trends and integrating own research into world science. The Program is popular with students and many of its graduates have been employed by the leading biological and agricultural research institutes.