An integrated approach to creating scab-resistant apple: phytopathological testing and marker-assisted selection
https://doi.org/10.30901/2658-6266-2018-1-25-33
Abstract
The creation of highly scab-resistant apple genotypes increases the profitability and environmental friendliness of the production of this fruit crop. Early stage evaluation of the resistance using phytopathological testing and DNA markers allows to accelerate the process of breeding for this trait allows the use. The purpose of the study was to comprehensively assess resistance to the causative agent of scab of hybrid seedlings of apple obtained from crossing susceptible (Rennet Simirenko) and resistant (Modi) cultivars for the Rvi6 gene, using infectious background and marker assisted selection. A phytopathological analysis of 207 hybrid apple seedlings against the natural background of apple scab pathogen revealed 117 (56%) plants without scab lesions (0 points). The remaining seedlings had lesions of varying degrees. DNA marker analysis of the Rvi6 gene allowed identification of 105 plants (51%) with the Rvi6rvi6 genotype and 102 (49%) – rvi6rvi6, which is close to a theoretical segregation ratio 1:1 in the crosses of this type. Comparison of the results of infectious evaluation and DNA-marker analysis showed 98% coincidence of the presence of the resistance gene with no lesions. In general, the complex use of the phenotypic and molecular markers evaluation of the hybrid family for resistance to Venturia inaequalis (Cooke) G. Winter shows a high degree of agreement between the results of the methods. However, the discrepancy between the qualitative classes of reactions to infection and the results of molecular genetic analysis indicates an insufficient strength of the natural infectious background of the study year. The low efficiency of the development of the disease was due to the unfavorable weather and climatic conditions at the beginning of the vegetative period and the formation of infection, which were expressed in a higher average monthly temperature and a small amount of precipitation compared to the norm. Our results suggest an advantage, a comprehensive assessment of resistance to the scab pathogen using an infectious background and marker-assisted selection for the Vf gene (Rvi6) in which the first stage involves the selection of resistant samples against a natural infectious background, followed by confirmation of the presence of the desired gene using a DNA marker analysis.
About the Authors
I. I. SuprunRussian Federation
A. I. Nasonov
Russian Federation
E. V. Lobdina
Russian Federation
E. A. Volodina
Russian Federation
References
1. Afunian MR, Goodwin PH, Hunter DM (2004) Linkage Vfa4 in Malus domestica and Malus floribunda with Vf resistance to the apple scab pathogen Venturia inaequalis. Plant Pathology 53: 461–467 DOI: 10.1111/j.1365–3059.2004.01047.x
2. Bus VGM, Rikkerink EH, Caffier V, Durel CE, Plummer KM (2011) Revision of the nomenclature of the differential host–pathogen interactions of Venturia inaequalis and Malus. Annual Review of Phytopathology 49: 391–413 DOI: 10.1146/annurev-phyto-072910-095339.
3. Chevalier M, Lespinasse Y, Renaudin S (1991) A microscopic study of the different classes of symptoms coded by the Vf gene in apple for resistance to scab (Venturia inaequalis). Plant Pathology 40(2): 249-256.
4. Clark MD, Bus VG, Luby JJ, Bradeen JM (2014) Characterization of the defence response to Venturia inaequalis in ‘Honeycrisp’apple, its ancestors, and progeny. European journal of plant pathology 140(1): 69-81.
5. Fedorova RN (1977) Scab of apple trees (Parsha yabloni). – Leningrad: 61 [in Russian] (Фёдорова Р. Н. Парша яблони. – Ленинград: Колос, 1977. 61 с).
6. Gessler C, Patocchi A, Sansavini S, Tartarini S, Gianfranceschi L (2006) Venturia inaequalis resistance in apple. Critical Reviews in Plant Sciences 25 (6): 473–503.
7. Gianfranceschi L, Koller B, Seglias N, Kellerhals M, Gessler C (1996) Molecular selection in apple for resistance to scab caused by Venturia inaequalis. Theoretical and Applied Genetics 93 (1–2): 199–204 DOI: 10.1007/BF00225746.
8. Kozlovskaya ZA, Vasekha VV, Gashenko TA, Urbanovich OYU (2009) The effectiveness of the use of the original forms of different genetic origin in the selection of apple trees for resistance to scab (Rezul'tativnost' ispol'zovaniya iskhodnyh form razlichnogo geneticheskogo proiskhozhdeniya v selekcii yabloni na ustojchivost' k parshe). Plodovodstvo – Orcharding: nauch. tr. RUP «Institut plodovodstva – Institute for Orcharding: 9–17 [in Russian] (Козловская З. А., Васеха В. В., Гашенко Т. А., Урбанович О. Ю. Результативность использования исходных форм различного генетического происхождения в селекции яблони на устойчивость к парше // Плодоводство: науч. тр. / РУП «Институт плодоводства». 2009. С. 9–17).
9. Kozlovskaya ZA (2004) Modern trends in apple selection (review of foreign breeding programs) (Sovremennye napravleniya selekcii yabloni (obzor zarubezhnyh selekcionnyh programm)). Plodovodstvo – Orcharding 16: 256–270. [in Russian] (Козловская З. А. Современные направления селекции яблони (обзор зарубежных селекционных программ) // Плодоводство. 2004. Т. 16. С. 256–270).
10. Kozlovskaya ZA (2006) Scientific basis of apple selection for intensive gardens of Belarus (Nauchnye osnovy selekcii yabloni dlya intensivnyh sadov Belarusi): avtoref. Dis. BGSKHA. Gorki: 39 [in Russian] (Козловская З. А. Научные основы селекции яблони для интенсивных садов Беларуси: автореф. Дис. БГСХА. – Горки. 2006. С. 39).
11. Masny S (2017) Occurrence of Venturia inaequalis races in Poland able to overcome specific apple scab resistance genes. European Journal of Plant Pathology 147 (2): 313–323 DOI: 10.1007/s10658-016-1003-x.
12. Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research 10: 4321–4325.
13. Nasonov AI, Suprun II, Lobodina EV, Stepanov IV, Barsukova ON (2017) Artificial scab resistance evaluation of Malus Orientalis forms – a potential source of new genes for resistance to apple scab (Ocenka na iskusstvennom infekcionnom fone form Malus orientalis – potencial'nyh istochnikov genov ustojchivosti k parshe yabloni). Politematicheskij setevoj ehlektronnyj nauchnyj zhurnal Kubanskogo gosudarstvennogo agrarnogo universiteta – Polythematic network electronic scientific journal of the Kuban State Agrarian University (Scientific journal of KubSAU) 131: 1377–1388 [in Russian] (Насонов А. И., Супрун И. И., Лободина Е. В., Степанов И. В., Барсукова О. Н. Оценка на искусственном инфекционном фоне форм Malus orientalis – потенциальных источников генов устойчивости к парше яблони // Политематический сетевой электронный научный журнал Кубанского государственного аграрного университета. 2017. № 131. С. 1377–1388) DOI: 10.21515/1990–4665–131–113.
14. Osterman LA (1981) Methods for the study of nucleic acids (Metody issledovaniya nukleinovyh kislot). M.: Nauka: 288 [in Russian] (Остерман Л. А. Методы исследования нуклеиновых кислот. – М.: Наука, 1981. С. 288).
15. Parisi L, Lespinasse Y, Guillaumes J, Krüger J (1993) A new race of Venturia inaequalis virulent to apples with resistance due to the Vf gene. Phytopathology 83 (5): 533–537 DOI: 10.1094/Phyto–83–533.
16. Parisi L, Laurens F, Didelot F, Evans K, Fischer C, Fouillet V, Tsipouridis C (2006) Geographical distribution of Venturia inaequalis strains virulent to the Vf gene in Europe. IOBC WPRS BULLETIN 29 (1): 49.
17. Roberts T, Crute I (1994) Apple scab resistance from Malus floribunda 821 (Vf) is rendered ineffective from Malus floribunda. Norwegian Journal of Agricultural Science 17: 403–406.
18. Sedov EN, Zhdanov VV, Serova ZM, Makarkina MA (2013) Apple tree breeding for scab resistance: the development of the ideas of NI Vavilova and IV Michurin (Selekciya yabloni na ustojchivost' k parshe: razvitie idej NI Vavilova i IV Michurina). Sel'skohozyajstvennaya biologiya – Agricultural biology 1: 42–52 [in Russian] (Седов Е. Н., Жданов В. В., Серова З. М., Макаркина М. А. Селекция яблони на устойчивость к парше: развитие идей НИ Вавилова и ИВ Мичурина // Сельскохозяйственная биология. 2013. №. 1. С. 42–52) DOI: 10.15389/agrobiology.2013.1.42rus.
19. Suprun II, Nasonov AI, YAkuba GV, Lobodina EV, Barsukova ON (2016) Effective selection of apple seedlings in a seed plot on resistance to scab and powder mildew (Ehffektivnost' otbora seyancev yabloni v shkolke na ustojchivost' k parshe i muchnistoj rose). Plodovodstvo i vinogradarstvo Yuga Rossii – Journal Kubansad 38(2): 117–129 [in Russian] (Супрун И. И., Насонов А. И., Якуба Г. В., Лободина Е. В., Барсукова О. Н. Эффективность отбора сеянцев яблони в школке на устойчивость к парше и мучнистой росе // Плодоводство и виноградарство Юга России. 2016. № 38 (2). С. 117–129).
20. Vavra R, Bocek S (2010) Apple scab (Venturia inaequalis (Cooke) Wint.) attacks on cultivars and genotypes carrying different resistant genes in plantings with breaking through Vf–Rvi6 gene. XIV International Conference on Organic Fruit Growing. Germany. 22–24.02.2010: 10–15.
21. Yakuba GV (2013) Protection of apple from scab in a climate of change (Ehkologizirovannaya zashchita yabloni ot parshi v usloviyah klimaticheskih izmenenij): Monograph – Krasnodar: GNU SKZNIISiV: 213 [in Russian] (Якуба Г. В. Экологизированная защита яблони от парши в условиях климатических изменений: Монография – Краснодар: ГНУ СКЗНИИСиВ. 2013. C. 213).
22. Zhdanov VV, Sedov EN (1991) Apple breeding for scab resistance (Selekciya yabloni na ustojchivost' k parshe). Tula: Priok. kn. izd–vo: 208 [in Russian] (Жданов В. В., Седов Е. Н. Селекция яблони на устойчивость к парше. Тула: Приок. кн. изд-во, 1991. 208 с.).
Review
For citations:
Suprun I.I., Nasonov A.I., Lobdina E.V., Volodina E.A. An integrated approach to creating scab-resistant apple: phytopathological testing and marker-assisted selection. Plant Biotechnology and Breeding. 2018;1(1):25-33. (In Russ.) https://doi.org/10.30901/2658-6266-2018-1-25-33