Preview

Plant Biotechnology and Breeding

Advanced search

In vitro collection of berry and fruit crops and their wild relatives at VIR

https://doi.org/10.30901/2658-6266-2018-1-43-51

Abstract

Background. The problem of ex situ conservation of plant genetic resources (PGR) is particularly relevant due to the decreasing of their genetic diversity. Accessions of vegetatively propagated crops are usually preserved in field genebanks. In vitro collections for medium-term storage and cryo collections for long-term storage are established as duplicate collections. Safe ex situ conservation of PGR is ensured by the existence of all three types of collections. The strategy of building up an in vitro collection of berry and fruit crops at VIR is based on the need to preserve domestic cultivars, local varieties and, primarily, landraces as well as accessions of crop wild relatives collected mainly in the Russian Federation and adjacent countries. Such genetic material is sparse or completely absent in the genebanks of other countries.

Materials and methods. Accessions from the field genebanks maintained at VIR’s experiment stations in Pavlovsk and Maikop, samples obtained by collecting teams launched by VIR and other institutions were used to initiate in vitro culture. All procedures to preserve various fruit and berry germplasm in vitro at VIR in the state of active growth and under medium-term storage conditions have been carried out according to the protocols presented in the Methodological Guidelines of VIR’s Department of Biotechnology.

Results and conclusion. Currently, the in vitro collection of berry and fruit crops at VIR holds 330 accessions of raspberry, blackberry, honeysuckle, strawberry, stone fruit plants (cherry, plum), mountain ash, and black currant, including 236 cultivars, 14 hybrids and 80 accessions of crop wild relatives, 68 of which were collected in the Russian Federation and neighboring countries. At present, VIR’s in vitro collection is one of the largest in the network of European and Asian genebanks that preserve accessions of berry and fruit plants cultivated under temperate climate conditions. Germplasm from the in vitro collection is used for various purposes: to develop virus eradication techniques; for genotyping; to study physiological and biochemical processes occurring in micro-plants under medium term storage; for the development of cryopreservation methods and for establishment of cryo collections; in morphobiological studies of ex vitro plants, etc.

About the Authors

S. E. Dunaeva
N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR)
Russian Federation
42–44, Bolshaya Morskaya St., St. Petersburg, 190000


S. Yu. Orlova
N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR)
Russian Federation
42–44, Bolshaya Morskaya St., St. Petersburg, 190000


O. A. Tikhonova
N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR)
Russian Federation
42–44, Bolshaya Morskaya St., St. Petersburg, 190000


T. A. Gavrilenko
N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR)
Russian Federation
42–44, Bolshaya Morskaya St., St. Petersburg, 190000


References

1. Annual Report for Calendar Year 2014 Usda Ars NCGR, Corvallis // https://www.ars.usda.gov/ARSUserFiles/20721500/AnnualReports/CorvallisAnnualReport2014.pdf

2. Antonova O. Yu., Dunaeva S. Ye., Ukhatova Yu. V., Kamylina N. Yu., Dolganova N. A., Lisitsyna O. V., Gavrilenko T. A. Sanitation of raspberry from bush dwarf virus (RBDV) by complex therapy in culture in vitro // Dostizheniya nauki i tekhniki APK. 2015, vol. 29, no. 7, pp. 61–64 [in Russian] (Антонова О. Ю., Дунаева С. Е., Ухатова Ю. В., Камылина Н. Ю., Долганова Н. А., Лисицына О. В., Гавриленко Т. А. Оздоровление малины от вируса кустистой карликовости (RBDV) методом комплексной терапии в культуре in vitro // Достижения науки и техники АПК. 2015. Т. 29, № 7. С.61–64).

3. Cruz-Cruz C. A., González-Arnao M. T., Engelmann F Biotechnology and Conservation of Plant Biodiversity // Resources, 2013, 2, pp. 73–95. DOI:10.3390/resources2020073.

4. Dobrenkov E. A., Semenova L. G., Dunaeva S. E., Ukhatova Y. V. Adaptation of in vitro blackberry plants to field environments // Proceedings on applied botany, genetics and breeding, St. Petersburg : VIR, 2017, vol. 178, iss. 1, pp. 25–30 [in Russian] (Добренков Е. А., Семенова Л. Г., Дунаева С. Е., Ухатова Ю. В. Адаптация пробирочных растений ежевики к полевым условиям среды // Тр. по прикл. ботанике, генетике и селекции. СПб., 2017, Т. 178. Вып. 1. С. 24–30).

5. Dobrenkov E. A., Semenova L. G. et all. Raspberries and blackberries (the Response of plants to adverse environmental factors, chemical composition of fruits in conditions of a foothill zone of Republic Adygea): Catalogue of VIR world collection. (Malina i ezhevika (Reakcija rastenij na neblagoprijatnye faktory sredy, himicheskij sostav plodov v uslovijax predgornoy zony Respubliki Adygeja: Katalog mirovoj kollekcii VIR). St. Petersburg: VIR, 2008, vol. 790, 19 p. [in Russian] (Добренков Е. А., Семенова Л. Г. и др. Малина и ежевика (Реакция растений на неблагоприятные факторы среды, химический состав плодов в условиях предгорной зоны Республики Адыгея): Каталог мировой коллекции ВИР. СПб. : ВИР, 2008. Вып. 790. 19 с.).

6. Dunaeva S. E., Kudryakova N. V., Malyshev L. L., Lupysheva Yu. V., Gavrilenko T. A. In vitro collection of raspberries and blackberries and identification of samples by isoenzyme spectra // Agrarnaya Rossiya 2005, no. 2, pp. 49–55 [in Russian] (Дунаева С. Е., Кудрякова Н. В., Малышев Л. Л., Лупышева Ю. В., Гавриленко Т. А. In vitro коллекция малин и ежевик и идентификация образцов по изоферментным спектрам // Аграрная Рос-сия. 2005. № 2. С. 49–55).

7. Dunaeva S. E., Gavrilenko T. A. Collections of fruit and berry cultures in vitro: a strategy for the creation and storage // Proceedings on Applied Botani, Genetics and Breeding, 2007, vol. 161, pp. 10– 19 [in Russian] (Дунаева С. Е., Гавриленко Т. А. Коллекции плодовых и ягодных культур in vitro: стратегия создания и хранение // Тр. по прикл. ботанике, генетике и селекции. 2007. Т. 161. С. 10–19).

8. Dunaeva S. E., Pendinen G. I., Antonova O. Yu., Shvachko N. A., Ukhatova Yu. V., Shuvalova L. E., Volkova N. N., Gavrilenko T. A. Preservation of vegetatively propagated crops in in vitro and cryo collections. 2nd edition Methodical Guidelines (Soxranenie vegetativno razmnozhaemyx kul'tur v in vitro i kriokollekciyax. Metodicheskie ukazaniya). St Petersdburg : VIR, 2017, 71 p. [in Russian] (Дунаева С. Е., Пендинен Г. И., Антонова О. Ю., Швачко Н. А., Ухатова Ю. В., Шувалова Л. Е., Волкова Н. Н., Гавриленко Т. А. Сохранение вегетативно размножаемых культур в in vitro и крио коллекциях. Методические указания / под ред. Т. А. Гавриленко. СПб. : ВИР, 2017. 71 с.).

9. Engelmann F., Engels J. M. M. Technologies and strategies for ex situ conservation. In: Managing plant genetic diversity / eds. J. M. M. Engels, V. R. Rao, A. H. D Brown, M. T Jackson. IPGRI, Rome, 2003, pp. 89–104.

10. FAO. Genebank Standards for Plant Genetic Resources for Food and Agriculture // Rev. ed. Rome. 2014. 167 р.

11. Gavrilenko T. A., Dunaeva S. E., Truskinov E. V., Antonova O. Yu., Pendinen G. I., Lupysheva Yu. V., Rogovaya V. V., Shvachko N. A. The strategy of long-term conservation of the gene pool of vegetatively propagated agricultural plants under controlled environmental conditions // Proceedings on Applied Botany, Genetics and Breeding, 2007, vol. 164, pp. 273–283 [in Russian] (Гавриленко Т. А., Дунаева С. Е., Трускинов Э. В., Антонова О. Ю., Пендинен Г. И., Лупышева Ю. В., Роговая В. В., Швачко Н. А. Стратегия долгосрочного сохранения генофонда вегетативно размножаемых сельскохозяйственных растений в контролируемых условиях среды // Тр. по прикл. ботанике, генетике и селекции. 2007. Т. 164. С. 273–283).

12. Hanke M. V., Höfer M., Flachowsky H., Peil A. Fruit genetic resources management: collection, conservation, evaluation and utilization in Germany // Acta Hortic. 2014, vol. 1032, pp. 231–234.

13. Hao Y. J., Deng X. X. Genetically stable regeneration of apple plants from slow growth // Plant Cell Tissue Organ Cult. 2003, vol. 72, pp. 253–260.

14. Höfer M., Hanke M. V. Cryopreservation of fruit germplasm // In Vitro Cell. Dev. Biol.- Plant, 2017, vol. 53, no 4, pp. 372–381. http://selplod.ru/?pg=sortovedenie#top (Дата обращения 25.06.2018).

15. Jahn O. L., Westwood M. N. Maintenance of clonal germplasm // Hortscience, 1982, vol.17, p. 122.

16. Jenderek M .M., Reed B .M. Cryopreserved storage of clonal germplasm in the USDA National Plant Germplasm System // In Vitro Cellular and Developmental Biology – Plants, 2017, vol. 53, no 4, pp 299–308. DOI:10.1007/s11627-017-9828-3.

17. Kovalchuk I., Lyudvikova Y., Volgina M., Reed B. M. Medium, container and genotype all influence in vitro cold storage of apple germplasm // Plant Cell Tissue Organ Cult., 2009, vol. 96, pp. 127–136.

18. Lamoureux D., Sorokin A., Lefevre I., Alexanian S., Eyzaguirre P., Hausman J.-F. Investigation of genetic diversity in Russian collections of raspberry and blue honeysuckle // Plant Genet Resources, 2011, vol. 9, pp. 202–205.

19. Lefevre I., Ziebel J., Guignard C., Sorokin A., Tikhonova O., Dolganova N., Hoffmann L., Eyzaguirre P., Hausman J.-F. Evaluation and comparison of nutritional quality and bioactive compounds of berry fruits from Lonicera caerulea, Ribes L. species and Rubus idaeus grown in Russia // Journal Berry Res., 2011, vol. 1, pp. 159–167.

20. Lupysheva Yu. V., Dunaeva S. E., Pendinen G. I., Novikova L. Yu., Savelyeva N. V., Lutova L. А., Gavrilenko T. A. Regeneration and transformation of raspberry and blackberry varieties in in vitro culture // Vestnik Sankt-Peterburgskogo universiteta 2008. Ser. 3. iss. 2, pp. 28–35 [in Russian] (Лупышева Ю. В., Дунаева С. Е., Пендинен Г. И., Новикова Л .Ю., Савельева Н. В., Лутова Л. А., Гавриленко Т. А. Регенерация и трансформация сортов малины и ежевики в культуре in vitro // Вестник Санкт-Петербургского ун-та. 2008. Сер. 3. Вып. 2. С. 28–35.

21. Murashige T., Skoog F. A revised medium for rapid growth and bioassays with tobacco tissue cultures // Physiol Plant., 1962, vol. 15, pp. 473–497.

22. Orlova S. Y. Biological features and selection value of cherry varieties in the conditions of the North-West of Russia : PhD Diss. Abstract, St. Petersburg, 2002, 20 p. [in Russian] (Орлова С. Ю. Биологические особенности и селекционная ценность сортов вишни в условиях Северо-Запада России : автореф. дисс. ... канд. биол. наук, Л., 2002, 20 с.).

23. Panis B., Lambardi M. Status of cryopreservation technologies in plants (crops and forest trees). In: The role of biotechnology. Villa Gualino, 5-7 March, Turin, Italy 2005, pp. 43–54.

24. Plekhanova M. N., Kondrikova A. V., Khayrova L. N. Varieties and species of honeysuckle (Lonicera subsect. Caeruleae) – sources and donors of economically valuable traits for breeding. Catalog of the world collection of VIR. (Sorta i vidy zhimolosti (Lonicera subsect. Caeruleae) – istochniki i donory hozyajstvenno-cennyh priznakov dlya selekcii. Katalog mirovoj kollekcii VIR). St. Petersburg, 1995. Iss. 665. 61 p. [in Russian] ( Плеханова М. Н., Кондрикова А. В., Хайрова Л. Н. Сорта и виды жимолости (Lonicera subsect. Caeruleae) – источники и доноры хозяйственно-ценных признаков для селекции. Каталог мировой коллекции ВИР. СПб., 1995. Вып. 665. 61 с.).

25. Reed B. M., Engelmann F., Dullo E., Engels J. Technical quidelines for the management of field and in vitro germplasm collections // IPGRI, Italy, 2004, 105 p.

26. Samatova I. S., Dunaeva S. E., Sharova E. I., Shchiparev S. M., Medvedev S. S., Gavrilenko T. A. Peculiarities of micropropagation and dynamics of morphophysiological indices of some representatives of the genera Rubus and Fragaria (Rosaceae) during in vitro storage // Rastitel'nye resursy. 2009, vol. 45, no. 4, pp. 1– 12 [in Russian] (Саматова И. С., Дунаева С. Е., Шарова Е. И., Щипарев С. М., Медведев С. С., Гавриленко Т .А. Особенности микроразмножения и динамика морфофизиологических показателей некоторых представителей родов Rubus и Fragaria (Rosaceae)при хранении in vitro // Растительные ресурсы. 2009. Т. 45, № 4. С. 1–12).

27. Skvortsov A. K., Kuklina A G. Blue honeysuckle (Golubye zhimolosti). Moscow, 2002, 144 p. [in Russian] (Скворцов А. К., Куклина А. Г. Голубые жимолости. М., 2002. 144 с.).

28. The state register of selection achievements (Gosudarstvennyj reestr selekcionnyh dostizhenij, dopushchennyh k ispol'zovaniyu (na 7 fevralya 2017 g.) [in Russian] (Государственный реестр селекционных достижений, допущенных к использованию (на 7 февраля 2017 г.): http://reestr.gossort.com/reestr-1.html (Дата обращения 08.04.2018).

29. Ukhatova Y. V., Dunaeva S. E., Antonova O. Y., Apalikova O. V., Pozdniakova K. S., Novikova L. Y., Shuvalova L. E., Gavrilenko T. A. Cryopreservation of red raspberry cultivars from the VIR in vitro collection using a modified droplet vitrification method // In Vitro Cell. Dev. Biol.–Plant 2017, vol. 53, pp. 394– 401. DOI: 10.1007/s11627-017-9860-3.

30. Ukhatova Y. V. Improvement of methods of cryopreservation and recovery from viral diseases of samples of vegetatively propagated crops. PhD Diss. Abstract, St. Petersburg, 2017, 22 p. [in Russian] (Ухатова Ю. В. Совершенствование методов криоконсервации и оздоровления от вирусных болезней образцов вегетативно размножаемых культур // Автореф. дис. ... канд. биол. наук, Санкт-Петербург, 2017, 22 с.)


Review

For citations:


Dunaeva S.E., Orlova S.Yu., Tikhonova O.A., Gavrilenko T.A. In vitro collection of berry and fruit crops and their wild relatives at VIR. Plant Biotechnology and Breeding. 2018;1(1):43-51. (In Russ.) https://doi.org/10.30901/2658-6266-2018-1-43-51

Views: 1191


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 2658-6266 (Print)
ISSN 2658-6258 (Online)